The Bonus points do not work for the COOPERATION / TOURNAMENT/ EXPRESS GAMES

I picked up my bonus points and the other games all show the points but these three do not have points anymore for some reason.

Oh this is the second day this has happened.

Coop is on changeset 25 where bonus points occur the first time you login in the game's new day (e.g. rollover at 0:00) - no longer tied to a 22 hour timer. This can be confusing when playing in a number of servers with varying changesets, but will correct itself when each of those servers updates to the latest. This also means the timer on the main page for Coop will not be accurate, but Slagpit mentioned those will be removed in the future (when no server needs it anymore).